Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814178.1_cds_XP_016497838.1_11928
CDS Infomation

[gene=LOC107816620] [db_xref=GeneID:107816620] [protein=probable myosin-binding protein 5] [protein_id=XP_016497838.1] [location=complement(join(27045..27253,27337..28209,28646..29378))] [gbkey=CDS]
Sequence

ATGGCTTCAGGATCTTTCAAGTGTTATGTTGAACAAAAGACAGGGAAATTTGCATTCTTC
TTCATATATGCTGTTCTTGAATGGGTGATGATCATTCTGCTTTTCATTGAGGGGTTTCTT
GCTTTTTTCTCTAATGAATTCGCCAAGTTCTTCGACCTGAAAGTCCCCTGCTTACTTTGC
ACGAGGATCGATCACATTCTCGTTCACAGGAATGCCAACTTTTATTACAATGAATCCATT
TGTGAAGTCCACAAGAAGGACATTTCTTCCCTTGCTTATTGTCATGTCCACAAGAAGCTG
TCTGATATTAGGAACATGTGCGACGGCTGCCTTCTGTCATTTGCAACAGAGAAAGATGCT
GATTGCGATAGGTACAAGTCACTAGTTGGTATTTTGCACAAGGATATTGATTGCTTTGTG
GAGGATGACAAGAAAGTAGATACAAAATCAGGAAAGAAGGAAGATGAGGTCATCCAAATT
GAAAAGGGCGGAATCGTTGGGTGTTCTTGCTGTGGGGAGATTCTAAAGACAAAGTCAAAA
TATTCCAGGAATGCATCAATGAAGGGAAATCCTTATTCTCAAGCTCCTGCTCCATCTCCA
AGATCTCCCTTGACGACATGGAGAAATGAGGAAGCCCGCCATTTAGAATTGCCTCATACT
CAATACACAGAGGTTAAGTTCATCTCAGATAATGATTTGGACCTTCCTGCTGATGAGGGT
CTCCCTAGTGGAGGTAGAGAGGATATTAAAGCTGCTACTGTACCACTAATACCAGATTCG
GAGGAGATAAATGATGATGCCTTGAAAACGCCAAATTTTACAAGAAACAAATTTTTTGGT
ATCCCATTGTCAGACTCAGCTCATGCTAGCCCTAGGTGGTCACACAGGCCTAGAAAATTG
AGTATGGATATTAAGAGTGAATTCATTTCAGAAACTAATGACGCGAGTACAGTAAATGAA
TCTGACGATGACATCCTGCATCGCTTGAAGAGACAAGTTCGTTTGGACCACAAGTCCCTC
ATGGCACTTTACATGGAACTTGACGAAGAAAGAAGTGCCGCTGCTGTTGCAGCAAACAAT
GCCATGGCCATGATCACTCGCTTACAAGCAGAGAAAGCCGCTGTCCAAATGGAGGCATTG
CAGTACCAAAGAATGATGGAAGAGCAGGCGGAATATGATCAAGAGGCGATGCAGGTCATG
AAAGACATGCTTTTGAAGAGAGAAGAAGAGATAAAGGTCTTAGAAGCTGAACTTGAGACA
TATAGGGAAAGATATGGCCATATCAAGAAAGTAGGTAGTGAGGTCTGTGAGGTTGATGCA
GATGAAGATTATCAAGAGTGGAATTCTCATTCTTTGTCATCCGTTAGTGAAAGATCAGCG
TGTGTCAGTCCTGATGAAGGAGATCAACATGGAGTAAATGACTGCTCTTTTGAATCTGGT
GAATATGGAGGGGAAAATGTGGATGAATCACATATTGATTTTGAGAAGGAGAGATCGTAT
CTCATGGGTTTGTTGACAAATCTTGAAGAGAAAATTAAAACATCTAAGGATGAAGGATTT
CATGTTTTAGAAACAAACGAGGTTAAGCATGGATCCGGAGGAAAAGGAAATGAAAATAAG
GTAACTCTTACAAGAGAAGTGTCACTAATTAGAGAGAGATTGAGAGCCATTGAAGCAGAG
AGCGGCTTCTTAAAACATGCAGCTATGACATTACAGAGGGATGGTGAAGGAACCAAACTC
TTGACTGAGATAGCTGAACATCTGCGGAGACTTAGGCAATCAATTGATTCCCCATCAAAG
GATGCAAATGCATGA

Peptide Sequence

PEP ID

XP_016497838.1
PEP Infomation

PREDICTED: probable myosin-binding protein 5 [Nicotiana tabacum]
Sequence

MASGSFKCYVEQKTGKFAFFFIYAVLEWVMIILLFIEGFLAFFSNEFAKFFDLKVPCLLC
TRIDHILVHRNANFYYNESICEVHKKDISSLAYCHVHKKLSDIRNMCDGCLLSFATEKDA
DCDRYKSLVGILHKDIDCFVEDDKKVDTKSGKKEDEVIQIEKGGIVGCSCCGEILKTKSK
YSRNASMKGNPYSQAPAPSPRSPLTTWRNEEARHLELPHTQYTEVKFISDNDLDLPADEG
LPSGGREDIKAATVPLIPDSEEINDDALKTPNFTRNKFFGIPLSDSAHASPRWSHRPRKL
SMDIKSEFISETNDASTVNESDDDILHRLKRQVRLDHKSLMALYMELDEERSAAAVAANN
AMAMITRLQAEKAAVQMEALQYQRMMEEQAEYDQEAMQVMKDMLLKREEEIKVLEAELET
YRERYGHIKKVGSEVCEVDADEDYQEWNSHSLSSVSERSACVSPDEGDQHGVNDCSFESG
EYGGENVDESHIDFEKERSYLMGLLTNLEEKIKTSKDEGFHVLETNEVKHGSGGKGNENK
VTLTREVSLIRERLRAIEAESGFLKHAAMTLQRDGEGTKLLTEIAEHLRRLRQSIDSPSK
DANA

Transcript Sequence

Gene sequence data has not been registered.